WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A7A.20.1 Sequence Name  Y110A7A.20.1
Length (nt)  463   Chromosome Location  I: 5100751-5101732
Chromosome . Primary Identifier  I Chromosome Location . Start  5100751
Chromosome Location . End  5101732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022465 ift-20 Y110A7A.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.20 Y110A7A.20 390   I: 5100766-5100838

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.20.1 5100751 5101732 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11698   88   I: 5100751-5100838 Caenorhabditis elegans
Exon11699   107   I: 5101314-5101420 Caenorhabditis elegans
Exon11700   268   I: 5101465-5101732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.20.1 5100751 5101732 1

1 Sequence

Length
463

1 Sequence Ontology Term

Identifier Name Description
transcript