WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A7A.13.1 Sequence Name  Y110A7A.13.1
Length (nt)  1192   Chromosome Location  I: 5103581-5104911
Chromosome . Primary Identifier  I Chromosome Location . Start  5103581
Chromosome Location . End  5104911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000502 chp-1 Y110A7A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.13 Y110A7A.13 966   I: 5103807-5104130

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.13.1 5103581 5104911 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11705   550   I: 5103581-5104130 Caenorhabditis elegans
Exon11706   285   I: 5104180-5104464 Caenorhabditis elegans
Exon11707   281   I: 5104511-5104791 Caenorhabditis elegans
Exon11708   76   I: 5104836-5104911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.13.1 5103581 5104911 -1

1 Sequence

Length
1192

1 Sequence Ontology Term

Identifier Name Description
transcript