WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y110A7A.11 Sequence Name  Y110A7A.11
Length (nt)  765   Chromosome Location  I: 5106293-5106388
Chromosome . Primary Identifier  I Chromosome Location . Start  5106293
Chromosome Location . End  5106388
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34394 USE-1 29.2 254 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00055312
WBRNAi00026579
WBRNAi00026583
WBRNAi00087112
WBRNAi00004525
WBRNAi00081321
WBRNAi00000117
WBRNAi00087196
WBRNAi00026578
WBRNAi00026582
WBRNAi00087143
WBRNAi00087142
WBRNAi00087145
WBRNAi00087144
WBRNAi00087159
WBRNAi00087158
WBRNAi00087222
WBRNAi00076755
WBRNAi00064471
WBRNAi00070973
WBRNAi00087109
WBRNAi00087111
WBRNAi00087110
WBRNAi00085755
WBRNAi00073331
WBRNAi00073330
WBRNAi00082389
WBRNAi00036550
WBRNAi00110516
WBRNAi00110518

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.11 5106293 5106388 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022460 use-1 Y110A7A.11 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.11 5106293 5106388 1
CDS:Y110A7A.11 5106440 5106495 1
CDS:Y110A7A.11 5106546 5106621 1
CDS:Y110A7A.11 5106881 5106968 1
CDS:Y110A7A.11 5107013 5107147 1
CDS:Y110A7A.11 5107196 5107371 1
CDS:Y110A7A.11 5107421 5107558 1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y110A7A.11.1 Y110A7A.11.1 921   I: 5106204-5107625