WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A7A.4.1 Sequence Name  Y110A7A.4.1
Length (nt)  1033   Chromosome Location  I: 5138250-5139382
Chromosome . Primary Identifier  I Chromosome Location . Start  5138250
Chromosome Location . End  5139382 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022455 tyms-1 Y110A7A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.4 Y110A7A.4 939   I: 5138270-5138471

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.4.1 5138250 5139382 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11857   222   I: 5138250-5138471 Caenorhabditis elegans
Exon11858   452   I: 5138516-5138967 Caenorhabditis elegans
Exon11859   359   I: 5139024-5139382 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.4.1 5138250 5139382 1

1 Sequence

Length
1033

1 Sequence Ontology Term

Identifier Name Description
transcript