WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A7A.3.1 Sequence Name  Y110A7A.3.1
Length (nt)  1625   Chromosome Location  I: 5141673-5149226
Chromosome . Primary Identifier  I Chromosome Location . Start  5141673
Chromosome Location . End  5149226 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006797 unc-63 Y110A7A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.3 Y110A7A.3 1509   I: 5141679-5141787

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.3.1 5141673 5149226 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11863   115   I: 5141673-5141787 Caenorhabditis elegans
Exon11864   134   I: 5142175-5142308 Caenorhabditis elegans
Exon11865   110   I: 5143710-5143819 Caenorhabditis elegans
Exon11866   93   I: 5143871-5143963 Caenorhabditis elegans
Exon11867   267   I: 5146070-5146336 Caenorhabditis elegans
Exon11868   319   I: 5147062-5147380 Caenorhabditis elegans
Exon11869   123   I: 5147657-5147779 Caenorhabditis elegans
Exon11870   131   I: 5147937-5148067 Caenorhabditis elegans
Exon11871   82   I: 5148308-5148389 Caenorhabditis elegans
Exon11872   251   I: 5148976-5149226 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.3.1 5141673 5149226 1

1 Sequence

Length
1625

1 Sequence Ontology Term

Identifier Name Description
transcript