WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y110A7A.2 Sequence Name  Y110A7A.2
Length (nt)  1008   Chromosome Location  I: 5154529-5154685
Chromosome . Primary Identifier  I Chromosome Location . Start  5154529
Chromosome Location . End  5154685
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30308 TRF-2 37.8 335 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055322
WBRNAi00004531
WBRNAi00112692

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.2 5154529 5154685 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022454 trf-2 Y110A7A.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.2 5154529 5154685 1
CDS:Y110A7A.2 5154948 5155119 1
CDS:Y110A7A.2 5155659 5155954 1
CDS:Y110A7A.2 5156890 5157012 1
CDS:Y110A7A.2 5157485 5157576 1
CDS:Y110A7A.2 5158300 5158467 1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y110A7A.2.1 Y110A7A.2.1 1056   I: 5154514-5158500