WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0261.1 Sequence Name  B0261.1
Length (nt)  2340   Chromosome Location  I: 5263708-5264003
Chromosome . Primary Identifier  I Chromosome Location . Start  5263708
Chromosome Location . End  5264003
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0261.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29531 VEP-1 87.1 779 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00038816
WBRNAi00028033
WBRNAi00094002
WBRNAi00070977
WBRNAi00116474
WBRNAi00107546
WBRNAi00024366
WBRNAi00024367
WBRNAi00106810
WBRNAi00002846
WBRNAi00107112
WBRNAi00107062
WBRNAi00107480
WBRNAi00107422
WBRNAi00107592

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0261.1 5263708 5264003 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015091 vep-1 B0261.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0261.1 5263708 5264003 1
CDS:B0261.1 5264062 5264485 1
CDS:B0261.1 5264818 5264914 1
CDS:B0261.1 5264962 5265086 1
CDS:B0261.1 5265151 5265570 1
CDS:B0261.1 5266281 5266668 1
CDS:B0261.1 5266714 5266809 1
CDS:B0261.1 5267320 5267655 1
CDS:B0261.1 5267959 5268116 1

1 Sequence

Length
2340

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0261.1.1 B0261.1.1 2618   I: 5263694-5268380