WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G8.1b.1 Sequence Name  C01G8.1b.1
Length (nt)  1007   Chromosome Location  I: 5273012-5274270
Chromosome . Primary Identifier  I Chromosome Location . Start  5273012
Chromosome Location . End  5274270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015312 C01G8.1 C01G8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G8.1b C01G8.1b 945   I: 5273012-5273251

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.1b.1 5273012 5274270 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12193   240   I: 5273012-5273251 Caenorhabditis elegans
Exon12195   198   I: 5273305-5273502 Caenorhabditis elegans
Exon12196   191   I: 5273555-5273745 Caenorhabditis elegans
Exon12199   120   I: 5273795-5273914 Caenorhabditis elegans
Exon12201   160   I: 5273967-5274126 Caenorhabditis elegans
Exon12203   98   I: 5274173-5274270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.1b.1 5273012 5274270 -1

1 Sequence

Length
1007

1 Sequence Ontology Term

Identifier Name Description
transcript