WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G8.5a.1 Sequence Name  C01G8.5a.1
Length (nt)  2360   Chromosome Location  I: 5284026-5291604
Chromosome . Primary Identifier  I Chromosome Location . Start  5284026
Chromosome Location . End  5291604 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001333 erm-1 C01G8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G8.5a C01G8.5a 1692   I: 5284598-5284690

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.5a.1 5284026 5291604 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12237   665   I: 5284026-5284690 Caenorhabditis elegans
Exon12239   167   I: 5285219-5285385 Caenorhabditis elegans
Exon12241   106   I: 5285463-5285568 Caenorhabditis elegans
Exon12243   348   I: 5286102-5286449 Caenorhabditis elegans
Exon12245   180   I: 5286532-5286711 Caenorhabditis elegans
Exon12247   183   I: 5287451-5287633 Caenorhabditis elegans
Exon12249   160   I: 5287682-5287841 Caenorhabditis elegans
Exon12251   155   I: 5288164-5288318 Caenorhabditis elegans
Exon12253   201   I: 5289993-5290193 Caenorhabditis elegans
Exon12255   84   I: 5290435-5290518 Caenorhabditis elegans
Exon12258   111   I: 5291494-5291604 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.5a.1 5284026 5291604 -1

1 Sequence

Length
2360

1 Sequence Ontology Term

Identifier Name Description
transcript