WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G8.5b.1 Sequence Name  C01G8.5b.1
Length (nt)  2290   Chromosome Location  I: 5284062-5290694
Chromosome . Primary Identifier  I Chromosome Location . Start  5284062
Chromosome Location . End  5290694 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G8.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001333 erm-1 C01G8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G8.5b C01G8.5b 1695   I: 5284598-5284690

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.5b.1 5284062 5290694 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12238   629   I: 5284062-5284690 Caenorhabditis elegans
Exon12240   167   I: 5285219-5285385 Caenorhabditis elegans
Exon12242   106   I: 5285463-5285568 Caenorhabditis elegans
Exon12244   348   I: 5286102-5286449 Caenorhabditis elegans
Exon12246   180   I: 5286532-5286711 Caenorhabditis elegans
Exon12248   183   I: 5287451-5287633 Caenorhabditis elegans
Exon12250   160   I: 5287682-5287841 Caenorhabditis elegans
Exon12252   155   I: 5288164-5288318 Caenorhabditis elegans
Exon12254   201   I: 5289993-5290193 Caenorhabditis elegans
Exon12256   84   I: 5290435-5290518 Caenorhabditis elegans
Exon12257   77   I: 5290618-5290694 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.5b.1 5284062 5290694 -1

1 Sequence

Length
2290

1 Sequence Ontology Term

Identifier Name Description
transcript