WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G8.9a.2 Sequence Name  C01G8.9a.2
Length (nt)  6380   Chromosome Location  I: 5300852-5313930
Chromosome . Primary Identifier  I Chromosome Location . Start  5300852
Chromosome Location . End  5313930 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G8.9a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002717 let-526 C01G8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G8.9a C01G8.9a 5064   I: 5301768-5301905

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.9a.2 5300852 5313930 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12267   1054   I: 5300852-5301905 Caenorhabditis elegans
Exon12273   347   I: 5302301-5302647 Caenorhabditis elegans
Exon12278   112   I: 5302697-5302808 Caenorhabditis elegans
Exon12283   310   I: 5302859-5303168 Caenorhabditis elegans
Exon12288   1064   I: 5303285-5304348 Caenorhabditis elegans
Exon12293   641   I: 5304441-5305081 Caenorhabditis elegans
Exon12298   1197   I: 5305251-5306447 Caenorhabditis elegans
Exon12303   400   I: 5309089-5309488 Caenorhabditis elegans
Exon12308   191   I: 5309550-5309740 Caenorhabditis elegans
Exon12313   766   I: 5310063-5310828 Caenorhabditis elegans
Exon12321   93   I: 5313518-5313610 Caenorhabditis elegans
Exon12325   75   I: 5313676-5313750 Caenorhabditis elegans
Exon12333   130   I: 5313801-5313930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.9a.2 5300852 5313930 -1

1 Sequence

Length
6380

1 Sequence Ontology Term

Identifier Name Description
transcript