WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G8.9c.1 Sequence Name  C01G8.9c.1
Length (nt)  5456   Chromosome Location  I: 5301768-5313922
Chromosome . Primary Identifier  I Chromosome Location . Start  5301768
Chromosome Location . End  5313922 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G8.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002717 let-526 C01G8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G8.9c C01G8.9c 5307   I: 5301768-5301905

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.9c.1 5301768 5313922 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12269   138   I: 5301768-5301905 Caenorhabditis elegans
Exon12274   347   I: 5302301-5302647 Caenorhabditis elegans
Exon12279   112   I: 5302697-5302808 Caenorhabditis elegans
Exon12284   310   I: 5302859-5303168 Caenorhabditis elegans
Exon12289   1064   I: 5303285-5304348 Caenorhabditis elegans
Exon12294   641   I: 5304441-5305081 Caenorhabditis elegans
Exon12299   1197   I: 5305251-5306447 Caenorhabditis elegans
Exon12304   400   I: 5309089-5309488 Caenorhabditis elegans
Exon12309   191   I: 5309550-5309740 Caenorhabditis elegans
Exon12314   766   I: 5310063-5310828 Caenorhabditis elegans
Exon12322   93   I: 5313518-5313610 Caenorhabditis elegans
Exon12326   75   I: 5313676-5313750 Caenorhabditis elegans
Exon12329   122   I: 5313801-5313922 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.9c.1 5301768 5313922 -1

1 Sequence

Length
5456

1 Sequence Ontology Term

Identifier Name Description
transcript