WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G8.9d.1 Sequence Name  C01G8.9d.1
Length (nt)  5635   Chromosome Location  I: 5301768-5313926
Chromosome . Primary Identifier  I Chromosome Location . Start  5301768
Chromosome Location . End  5313926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G8.9d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002717 let-526 C01G8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G8.9d C01G8.9d 5226   I: 5301768-5301905

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.9d.1 5301768 5313926 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12270   138   I: 5301768-5301905 Caenorhabditis elegans
Exon12275   347   I: 5302301-5302647 Caenorhabditis elegans
Exon12280   112   I: 5302697-5302808 Caenorhabditis elegans
Exon12285   310   I: 5302859-5303168 Caenorhabditis elegans
Exon12290   1064   I: 5303285-5304348 Caenorhabditis elegans
Exon12295   641   I: 5304441-5305081 Caenorhabditis elegans
Exon12300   1197   I: 5305251-5306447 Caenorhabditis elegans
Exon12305   400   I: 5309089-5309488 Caenorhabditis elegans
Exon12310   191   I: 5309550-5309740 Caenorhabditis elegans
Exon12315   766   I: 5310063-5310828 Caenorhabditis elegans
Exon12317   174   I: 5311550-5311723 Caenorhabditis elegans
Exon12319   94   I: 5313517-5313610 Caenorhabditis elegans
Exon12327   75   I: 5313676-5313750 Caenorhabditis elegans
Exon12332   126   I: 5313801-5313926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.9d.1 5301768 5313926 -1

1 Sequence

Length
5635

1 Sequence Ontology Term

Identifier Name Description
transcript