WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C01G8.9e Sequence Name  C01G8.9e
Length (nt)  5511   Chromosome Location  I: 5301768-5317392
Chromosome . Primary Identifier  I Chromosome Location . Start  5301768
Chromosome Location . End  5317392 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G8.9e

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002717 let-526 C01G8.9 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.9e 5301768 5317392 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12271   138   I: 5301768-5301905 Caenorhabditis elegans
Exon12276   347   I: 5302301-5302647 Caenorhabditis elegans
Exon12281   112   I: 5302697-5302808 Caenorhabditis elegans
Exon12286   310   I: 5302859-5303168 Caenorhabditis elegans
Exon12291   1064   I: 5303285-5304348 Caenorhabditis elegans
Exon12296   641   I: 5304441-5305081 Caenorhabditis elegans
Exon12301   1197   I: 5305251-5306447 Caenorhabditis elegans
Exon12306   400   I: 5309089-5309488 Caenorhabditis elegans
Exon12311   191   I: 5309550-5309740 Caenorhabditis elegans
Exon12316   766   I: 5310063-5310828 Caenorhabditis elegans
Exon12323   93   I: 5313518-5313610 Caenorhabditis elegans
Exon12328   75   I: 5313676-5313750 Caenorhabditis elegans
Exon12331   124   I: 5313801-5313924 Caenorhabditis elegans
Exon12339   53   I: 5317340-5317392 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G8.9e 5301768 5317392 -1

1 Sequence

Length
5511

1 Sequence Ontology Term

Identifier Name Description
transcript