WormMine: Gene WBGene00197167

• WormBase Gene ID: WBGene00197167
• Gene Name: F48C1.13
• Sequence Name: F48C1.13
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by pmt-2 based on microarray studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 148

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00197167

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F48C1.13	F48C1.13	148	I: 5316050-5316197

Other

0 CDSs

0 RNAi Result

4 Allele

• gk962706
• gk963902
• WBVar01344317
• gk110945

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00197167
• Start: 5316050
• End: 5316197
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in pmt-2(RNAi) animals comparing to control animals iinjected with empty vector.	Fold-change > 1.5, ANOVA P values < 0.05.	WBPaper00055482:pmt-2(RNAi)_downregulated
Hypoxia: 0.5% oxygen 2 hours.	Transcripts that showed significantly increased expression after hypoxia in an egl-9 / hif-1 independent manner.	DESeq2 p-value <0.05, expression of hypoxia vs. normxia >= 2, expression in egl09(sa307) vs N2 < 2, expression of egl-9(sa307); hif-1(ia04) vs N2 <= 2.	WBPaper00055344:hypoxia_regulated_HIF-1_independent

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00197167
• Start: 5316050
• End: 5316197
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 148

1 Sequence Ontology Term