WormMine: MRNA Transcript:F48C1.1b.1

• WormMine ID: Transcript:F48C1.1b.1
• Sequence Name: F48C1.1b.1
• Length (nt): 3277
• Chromosome Location: I: 5325549-5330222
• Chromosome . Primary Identifier: I
• Chromosome Location . Start: 5325549
• Chromosome Location . End: 5330222
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: F48C1.1b.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00018594	aman-3	F48C1.1	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:F48C1.1b	F48C1.1b	3138	I: 5325566-5325685

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: Transcript:F48C1.1b.1
• Start: 5325549
• End: 5330222
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

19 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon12353			137	I: 5325549-5325685	Caenorhabditis elegans
Exon12356			156	I: 5325739-5325894	Caenorhabditis elegans
Exon12358			118	I: 5325943-5326060	Caenorhabditis elegans
Exon12360			169	I: 5326111-5326279	Caenorhabditis elegans
Exon12362			128	I: 5326416-5326543	Caenorhabditis elegans
Exon12364			78	I: 5326596-5326673	Caenorhabditis elegans
Exon12366			274	I: 5326718-5326991	Caenorhabditis elegans
Exon12368			87	I: 5327097-5327183	Caenorhabditis elegans
Exon12370			90	I: 5327226-5327315	Caenorhabditis elegans
Exon12372			178	I: 5327405-5327582	Caenorhabditis elegans
Exon12374			139	I: 5327629-5327767	Caenorhabditis elegans
Exon12376			329	I: 5327861-5328189	Caenorhabditis elegans
Exon12378			128	I: 5328259-5328386	Caenorhabditis elegans
Exon12380			88	I: 5328433-5328520	Caenorhabditis elegans
Exon12382			111	I: 5328569-5328679	Caenorhabditis elegans
Exon12384			106	I: 5328725-5328830	Caenorhabditis elegans
Exon12386			220	I: 5328873-5329092	Caenorhabditis elegans
Exon12388			460	I: 5329405-5329864	Caenorhabditis elegans
Exon12389			281	I: 5329942-5330222	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:F48C1.1b.1
• Start: 5325549
• End: 5330222
• Strand: 1

1 Sequence

• Length: 3277

1 Sequence Ontology Term

• Name: transcript