WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48C1.7 Sequence Name  F48C1.7
Length (nt)  900   Chromosome Location  I: 5330643-5330712
Chromosome . Primary Identifier  I Chromosome Location . Start  5330643
Chromosome Location . End  5330712
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C1.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10744 SPE-11 35.1 299 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047730
WBRNAi00003717
WBRNAi00027663

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F48C1.7 5330643 5330712 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004965 spe-11 F48C1.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F48C1.7 5330643 5330712 -1
CDS:F48C1.7 5330759 5330856 -1
CDS:F48C1.7 5330902 5330997 -1
CDS:F48C1.7 5331045 5331199 -1
CDS:F48C1.7 5331372 5331497 -1
CDS:F48C1.7 5331545 5331833 -1
CDS:F48C1.7 5332092 5332157 -1

1 Sequence

Length
900

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48C1.7.1 F48C1.7.1 977   I: 5330578-5332169