WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48C1.9.1 Sequence Name  F48C1.9.1
Length (nt)  324   Chromosome Location  I: 5332249-5332780
Chromosome . Primary Identifier  I Chromosome Location . Start  5332249
Chromosome Location . End  5332780 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C1.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018601 F48C1.9 F48C1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48C1.9 F48C1.9 213   I: 5332340-5332472

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48C1.9.1 5332249 5332780 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12399   224   I: 5332249-5332472 Caenorhabditis elegans
Exon12400   100   I: 5332681-5332780 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48C1.9.1 5332249 5332780 -1

1 Sequence

Length
324

1 Sequence Ontology Term

Identifier Name Description
transcript