WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55A12.9a Sequence Name  F55A12.9a
Length (nt)  1413   Chromosome Location  I: 5373409-5373522
Chromosome . Primary Identifier  I Chromosome Location . Start  5373409
Chromosome Location . End  5373522
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08345 TENT-5, isoform a 54.3 470 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048424
WBRNAi00048425
WBRNAi00003779
WBRNAi00116611

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55A12.9a 5373409 5373522 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004131 tent-5 F55A12.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55A12.9a 5373409 5373522 -1
CDS:F55A12.9a 5373982 5374294 -1
CDS:F55A12.9a 5374359 5374708 -1
CDS:F55A12.9a 5374758 5375028 -1
CDS:F55A12.9a 5375076 5375191 -1
CDS:F55A12.9a 5376156 5376341 -1
CDS:F55A12.9a 5377303 5377365 -1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55A12.9a.1 F55A12.9a.1 2041   I: 5372854-5377438