WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24A11.8a.2 Sequence Name  C24A11.8a.2
Length (nt)  2410   Chromosome Location  I: 5402882-5412400
Chromosome . Primary Identifier  I Chromosome Location . Start  5402882
Chromosome Location . End  5412400 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24A11.8a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001491 frm-4 C24A11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24A11.8a C24A11.8a 1908   I: 5403321-5403455

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C24A11.8a.2 5402882 5412400 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12600   574   I: 5402882-5403455 Caenorhabditis elegans
Exon12606   174   I: 5403511-5403684 Caenorhabditis elegans
Exon12611   72   I: 5403894-5403965 Caenorhabditis elegans
Exon12617   68   I: 5405315-5405382 Caenorhabditis elegans
Exon12622   90   I: 5405433-5405522 Caenorhabditis elegans
Exon12627   134   I: 5405572-5405705 Caenorhabditis elegans
Exon12632   180   I: 5405754-5405933 Caenorhabditis elegans
Exon12637   131   I: 5405978-5406108 Caenorhabditis elegans
Exon12642   246   I: 5406401-5406646 Caenorhabditis elegans
Exon12647   88   I: 5406697-5406784 Caenorhabditis elegans
Exon12652   219   I: 5406832-5407050 Caenorhabditis elegans
Exon12657   76   I: 5407128-5407203 Caenorhabditis elegans
Exon12665   52   I: 5407573-5407624 Caenorhabditis elegans
Exon12670   105   I: 5407979-5408083 Caenorhabditis elegans
Exon12675   82   I: 5408150-5408231 Caenorhabditis elegans
Exon12681   62   I: 5408283-5408344 Caenorhabditis elegans
Exon12686   57   I: 5412344-5412400 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C24A11.8a.2 5402882 5412400 -1

1 Sequence

Length
2410

1 Sequence Ontology Term

Identifier Name Description
transcript