WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24A11.8a.1 Sequence Name  C24A11.8a.1
Length (nt)  2346   Chromosome Location  I: 5402889-5408344
Chromosome . Primary Identifier  I Chromosome Location . Start  5402889
Chromosome Location . End  5408344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24A11.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001491 frm-4 C24A11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24A11.8a C24A11.8a 1908   I: 5403321-5403455

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24A11.8a.1 5402889 5408344 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12603   567   I: 5402889-5403455 Caenorhabditis elegans
Exon12605   174   I: 5403511-5403684 Caenorhabditis elegans
Exon12610   72   I: 5403894-5403965 Caenorhabditis elegans
Exon12616   68   I: 5405315-5405382 Caenorhabditis elegans
Exon12621   90   I: 5405433-5405522 Caenorhabditis elegans
Exon12626   134   I: 5405572-5405705 Caenorhabditis elegans
Exon12631   180   I: 5405754-5405933 Caenorhabditis elegans
Exon12636   131   I: 5405978-5406108 Caenorhabditis elegans
Exon12641   246   I: 5406401-5406646 Caenorhabditis elegans
Exon12646   88   I: 5406697-5406784 Caenorhabditis elegans
Exon12651   219   I: 5406832-5407050 Caenorhabditis elegans
Exon12656   76   I: 5407128-5407203 Caenorhabditis elegans
Exon12664   52   I: 5407573-5407624 Caenorhabditis elegans
Exon12669   105   I: 5407979-5408083 Caenorhabditis elegans
Exon12674   82   I: 5408150-5408231 Caenorhabditis elegans
Exon12680   62   I: 5408283-5408344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24A11.8a.1 5402889 5408344 -1

1 Sequence

Length
2346

1 Sequence Ontology Term

Identifier Name Description
transcript