WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H7.2a.2 Sequence Name  C30H7.2a.2
Length (nt)  1768   Chromosome Location  I: 5416653-5420731
Chromosome . Primary Identifier  I Chromosome Location . Start  5416653
Chromosome Location . End  5420731 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H7.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016278 erp-44.1 C30H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H7.2a C30H7.2a 1182   I: 5417105-5417206

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H7.2a.2 5416653 5420731 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12701   554   I: 5416653-5417206 Caenorhabditis elegans
Exon12705   85   I: 5417939-5418023 Caenorhabditis elegans
Exon12709   139   I: 5418070-5418208 Caenorhabditis elegans
Exon12713   176   I: 5418254-5418429 Caenorhabditis elegans
Exon12717   248   I: 5418863-5419110 Caenorhabditis elegans
Exon12721   103   I: 5419202-5419304 Caenorhabditis elegans
Exon12725   85   I: 5419675-5419759 Caenorhabditis elegans
Exon12729   150   I: 5419805-5419954 Caenorhabditis elegans
Exon12733   96   I: 5420006-5420101 Caenorhabditis elegans
Exon12736   132   I: 5420600-5420731 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H7.2a.2 5416653 5420731 -1

1 Sequence

Length
1768

1 Sequence Ontology Term

Identifier Name Description
transcript