WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H7.2b.1 Sequence Name  C30H7.2b.1
Length (nt)  1236   Chromosome Location  I: 5417105-5420692
Chromosome . Primary Identifier  I Chromosome Location . Start  5417105
Chromosome Location . End  5420692 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H7.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016278 erp-44.1 C30H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H7.2b C30H7.2b 1236   I: 5417105-5417206

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H7.2b.1 5417105 5420692 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12703   102   I: 5417105-5417206 Caenorhabditis elegans
Exon12707   85   I: 5417939-5418023 Caenorhabditis elegans
Exon12711   139   I: 5418070-5418208 Caenorhabditis elegans
Exon12715   176   I: 5418254-5418429 Caenorhabditis elegans
Exon12719   248   I: 5418863-5419110 Caenorhabditis elegans
Exon12723   103   I: 5419202-5419304 Caenorhabditis elegans
Exon12727   85   I: 5419675-5419759 Caenorhabditis elegans
Exon12731   150   I: 5419805-5419954 Caenorhabditis elegans
Exon12735   96   I: 5420006-5420101 Caenorhabditis elegans
Exon12737   52   I: 5420641-5420692 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H7.2b.1 5417105 5420692 -1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
transcript