WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27C1.7b.1 Sequence Name  F27C1.7b.1
Length (nt)  700   Chromosome Location  I: 5428777-5429819
Chromosome . Primary Identifier  I Chromosome Location . Start  5428777
Chromosome Location . End  5429819 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27C1.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000230 atp-3 F27C1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27C1.7b F27C1.7b 687   I: 5428777-5428992

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27C1.7b.1 5428777 5429819 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12765   216   I: 5428777-5428992 Caenorhabditis elegans
Exon12770   98   I: 5429169-5429266 Caenorhabditis elegans
Exon12775   313   I: 5429311-5429623 Caenorhabditis elegans
Exon12776   73   I: 5429747-5429819 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27C1.7b.1 5428777 5429819 -1

1 Sequence

Length
700

1 Sequence Ontology Term

Identifier Name Description
transcript