WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F27C1.2a Sequence Name  F27C1.2a
Length (nt)  759   Chromosome Location  I: 5430167-5430235
Chromosome . Primary Identifier  I Chromosome Location . Start  5430167
Chromosome Location . End  5430235
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27C1.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09715 F27C1.2, isoform a 27.8 252 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00025267
WBRNAi00045724
WBRNAi00033278
WBRNAi00112311
WBRNAi00025268
WBRNAi00062024

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F27C1.2a 5430167 5430235 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017852 F27C1.2 F27C1.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F27C1.2a 5430167 5430235 1
CDS:F27C1.2a 5430283 5430511 1
CDS:F27C1.2a 5430578 5430705 1
CDS:F27C1.2a 5430773 5430992 1
CDS:F27C1.2a 5431043 5431155 1

1 Sequence

Length
759

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F27C1.2a.1 F27C1.2a.1 1057   I: 5430164-5431450