WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27C1.11b.1 Sequence Name  F27C1.11b.1
Length (nt)  4002   Chromosome Location  I: 5433905-5443026
Chromosome . Primary Identifier  I Chromosome Location . Start  5433905
Chromosome Location . End  5443026 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27C1.11b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017858 F27C1.11 F27C1.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27C1.11b F27C1.11b 3816   I: 5434091-5434181

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27C1.11b.1 5433905 5443026 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12794   277   I: 5433905-5434181 Caenorhabditis elegans
Exon12797   68   I: 5434233-5434300 Caenorhabditis elegans
Exon12799   78   I: 5434344-5434421 Caenorhabditis elegans
Exon12804   134   I: 5435812-5435945 Caenorhabditis elegans
Exon12806   118   I: 5436136-5436253 Caenorhabditis elegans
Exon12808   87   I: 5436363-5436449 Caenorhabditis elegans
Exon12810   135   I: 5436492-5436626 Caenorhabditis elegans
Exon12812   101   I: 5436674-5436774 Caenorhabditis elegans
Exon12814   130   I: 5436815-5436944 Caenorhabditis elegans
Exon12816   101   I: 5437468-5437568 Caenorhabditis elegans
Exon12818   79   I: 5437618-5437696 Caenorhabditis elegans
Exon12820   170   I: 5437747-5437916 Caenorhabditis elegans
Exon12822   101   I: 5438098-5438198 Caenorhabditis elegans
Exon12824   208   I: 5438252-5438459 Caenorhabditis elegans
Exon12826   81   I: 5438506-5438586 Caenorhabditis elegans
Exon12828   210   I: 5438952-5439161 Caenorhabditis elegans
Exon12830   124   I: 5439209-5439332 Caenorhabditis elegans
Exon12832   119   I: 5439637-5439755 Caenorhabditis elegans
Exon12834   193   I: 5439813-5440005 Caenorhabditis elegans
Exon12836   366   I: 5440049-5440414 Caenorhabditis elegans
Exon12838   236   I: 5440478-5440713 Caenorhabditis elegans
Exon12840   128   I: 5440906-5441033 Caenorhabditis elegans
Exon12842   300   I: 5441082-5441381 Caenorhabditis elegans
Exon12844   73   I: 5441635-5441707 Caenorhabditis elegans
Exon12846   115   I: 5441769-5441883 Caenorhabditis elegans
Exon12848   81   I: 5442099-5442179 Caenorhabditis elegans
Exon12850   108   I: 5442312-5442419 Caenorhabditis elegans
Exon12852   81   I: 5442946-5443026 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27C1.11b.1 5433905 5443026 -1

1 Sequence

Length
4002

1 Sequence Ontology Term

Identifier Name Description
transcript