WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27C1.1.1 Sequence Name  F27C1.1.1
Length (nt)  892   Chromosome Location  I: 5434805-5435785
Chromosome . Primary Identifier  I Chromosome Location . Start  5434805
Chromosome Location . End  5435785 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27C1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017851 F27C1.1 F27C1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27C1.1 F27C1.1 810   I: 5434854-5435009

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27C1.1.1 5434805 5435785 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12800   205   I: 5434805-5435009 Caenorhabditis elegans
Exon12801   454   I: 5435055-5435508 Caenorhabditis elegans
Exon12802   233   I: 5435553-5435785 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27C1.1.1 5434805 5435785 1

1 Sequence

Length
892

1 Sequence Ontology Term

Identifier Name Description
transcript