WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D4.5.2 Sequence Name  C09D4.5.2
Length (nt)  758   Chromosome Location  I: 5484779-5486354
Chromosome . Primary Identifier  I Chromosome Location . Start  5484779
Chromosome Location . End  5486354 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D4.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004431 rpl-19 C09D4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D4.5 C09D4.5 597   I: 5484830-5484959

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D4.5.2 5484779 5486354 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12957   181   I: 5484779-5484959 Caenorhabditis elegans
Exon12959   251   I: 5485052-5485302 Caenorhabditis elegans
Exon12961   211   I: 5485381-5485591 Caenorhabditis elegans
Exon12963   35   I: 5485708-5485742 Caenorhabditis elegans
Exon12965   80   I: 5486275-5486354 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D4.5.2 5484779 5486354 -1

1 Sequence

Length
758

1 Sequence Ontology Term

Identifier Name Description
transcript