WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D4.2.1 Sequence Name  C09D4.2.1
Length (nt)  920   Chromosome Location  I: 5491424-5493263
Chromosome . Primary Identifier  I Chromosome Location . Start  5491424
Chromosome Location . End  5493263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015633 C09D4.2 C09D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D4.2 C09D4.2 765   I: 5491500-5491767

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D4.2.1 5491424 5493263 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12980   344   I: 5491424-5491767 Caenorhabditis elegans
Exon12981   105   I: 5492184-5492288 Caenorhabditis elegans
Exon12982   105   I: 5492459-5492563 Caenorhabditis elegans
Exon12983   90   I: 5492618-5492707 Caenorhabditis elegans
Exon12984   83   I: 5492941-5493023 Caenorhabditis elegans
Exon12985   193   I: 5493071-5493263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D4.2.1 5491424 5493263 1

1 Sequence

Length
920

1 Sequence Ontology Term

Identifier Name Description
transcript