WormMine: Gene WBGene00199116

• WormBase Gene ID: WBGene00199116
• Gene Name: C09D4.8
• Sequence Name: C09D4.8
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by glp-1 and ogt-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 58

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00199116

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C09D4.8	C09D4.8	58	I: 5494417-5494474

Other

0 CDSs

0 RNAi Result

3 Allele

• gk962706
• gk963902
• gk111278

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00199116
• Start: 5494417
• End: 5494474
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrI_5493264..5494416
• Length (nt): 1153
• Chromosome Location: I: 5493264-5494416
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression glp-1(e2141); TU3401 animals comparing to in TU3401 animals.	Fold change > 2, FDR < 0.01.	WBPaper00065993:glp-1(e2141)_upregulated
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00199116
• Start: 5494417
• End: 5494474
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 58

1 Sequence Ontology Term