WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A3.6a.4 Sequence Name  F59A3.6a.4
Length (nt)  1246   Chromosome Location  I: 5510037-5511705
Chromosome . Primary Identifier  I Chromosome Location . Start  5510037
Chromosome Location . End  5511705 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.6a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019079 rpa-4 F59A3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A3.6a F59A3.6a 882   I: 5510454-5510642

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.6a.4 5510037 5511705 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13071   24   I: 5510037-5510060 Caenorhabditis elegans
Exon13076   93   I: 5510105-5510197 Caenorhabditis elegans
Exon13081   400   I: 5510243-5510642 Caenorhabditis elegans
Exon13089   90   I: 5510693-5510782 Caenorhabditis elegans
Exon13097   105   I: 5510834-5510938 Caenorhabditis elegans
Exon13103   95   I: 5510981-5511075 Caenorhabditis elegans
Exon13110   91   I: 5511121-5511211 Caenorhabditis elegans
Exon13115   120   I: 5511259-5511378 Caenorhabditis elegans
Exon13120   123   I: 5511429-5511551 Caenorhabditis elegans
Exon13126   105   I: 5511601-5511705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.6a.4 5510037 5511705 -1

1 Sequence

Length
1246

1 Sequence Ontology Term

Identifier Name Description
transcript