WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A3.2.1 Sequence Name  F59A3.2.1
Length (nt)  2173   Chromosome Location  I: 5512048-5514556
Chromosome . Primary Identifier  I Chromosome Location . Start  5512048
Chromosome Location . End  5514556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019075 F59A3.2 F59A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A3.2 F59A3.2 2064   I: 5512063-5512105

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.2.1 5512048 5514556 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13127   58   I: 5512048-5512105 Caenorhabditis elegans
Exon13128   655   I: 5512197-5512851 Caenorhabditis elegans
Exon13129   342   I: 5512903-5513244 Caenorhabditis elegans
Exon13130   239   I: 5513289-5513527 Caenorhabditis elegans
Exon13131   233   I: 5513576-5513808 Caenorhabditis elegans
Exon13132   150   I: 5513865-5514014 Caenorhabditis elegans
Exon13133   496   I: 5514061-5514556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.2.1 5512048 5514556 1

1 Sequence

Length
2173

1 Sequence Ontology Term

Identifier Name Description
transcript