WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A3.12.1 Sequence Name  F59A3.12.1
Length (nt)  1101   Chromosome Location  I: 5514651-5516025
Chromosome . Primary Identifier  I Chromosome Location . Start  5514651
Chromosome Location . End  5516025 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00185086 F59A3.12 F59A3.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A3.12 F59A3.12 885   I: 5514669-5514712

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.12.1 5514651 5516025 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13134   62   I: 5514651-5514712 Caenorhabditis elegans
Exon13135   145   I: 5514760-5514904 Caenorhabditis elegans
Exon13136   152   I: 5514948-5515099 Caenorhabditis elegans
Exon13137   109   I: 5515146-5515254 Caenorhabditis elegans
Exon13138   233   I: 5515304-5515536 Caenorhabditis elegans
Exon13139   64   I: 5515584-5515647 Caenorhabditis elegans
Exon13140   336   I: 5515690-5516025 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.12.1 5514651 5516025 1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
transcript