WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A3.7.1 Sequence Name  F59A3.7.1
Length (nt)  590   Chromosome Location  I: 5517347-5518567
Chromosome . Primary Identifier  I Chromosome Location . Start  5517347
Chromosome Location . End  5518567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019080 F59A3.7 F59A3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A3.7 F59A3.7 564   I: 5517369-5517495

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.7.1 5517347 5518567 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13148   149   I: 5517347-5517495 Caenorhabditis elegans
Exon13149   94   I: 5517870-5517963 Caenorhabditis elegans
Exon13150   76   I: 5518007-5518082 Caenorhabditis elegans
Exon13151   78   I: 5518130-5518207 Caenorhabditis elegans
Exon13152   40   I: 5518251-5518290 Caenorhabditis elegans
Exon13153   68   I: 5518335-5518402 Caenorhabditis elegans
Exon13154   85   I: 5518483-5518567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.7.1 5517347 5518567 -1

1 Sequence

Length
590

1 Sequence Ontology Term

Identifier Name Description
transcript