WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01A10.2h.1 Sequence Name  M01A10.2h.1
Length (nt)  4187   Chromosome Location  I: 5546120-5561641
Chromosome . Primary Identifier  I Chromosome Location . Start  5546120
Chromosome Location . End  5561641 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01A10.2h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006594 tom-1 M01A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01A10.2h M01A10.2h 3741   I: 5546227-5546246

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01A10.2h.1 5546120 5561641 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13204   127   I: 5546120-5546246 Caenorhabditis elegans
Exon13212   97   I: 5546300-5546396 Caenorhabditis elegans
Exon13218   240   I: 5546476-5546715 Caenorhabditis elegans
Exon13225   99   I: 5548095-5548193 Caenorhabditis elegans
Exon13231   77   I: 5548245-5548321 Caenorhabditis elegans
Exon13237   466   I: 5548378-5548843 Caenorhabditis elegans
Exon13243   237   I: 5548889-5549125 Caenorhabditis elegans
Exon13253   68   I: 5550822-5550889 Caenorhabditis elegans
Exon13259   157   I: 5550937-5551093 Caenorhabditis elegans
Exon13265   195   I: 5551213-5551407 Caenorhabditis elegans
Exon13272   111   I: 5551940-5552050 Caenorhabditis elegans
Exon13278   97   I: 5552098-5552194 Caenorhabditis elegans
Exon13284   143   I: 5552599-5552741 Caenorhabditis elegans
Exon13287   490   I: 5552880-5553369 Caenorhabditis elegans
Exon13296   153   I: 5555026-5555178 Caenorhabditis elegans
Exon13306   114   I: 5557669-5557782 Caenorhabditis elegans
Exon13316   146   I: 5559329-5559474 Caenorhabditis elegans
Exon13322   308   I: 5559768-5560075 Caenorhabditis elegans
Exon13330   64   I: 5560310-5560373 Caenorhabditis elegans
Exon13337   114   I: 5560525-5560638 Caenorhabditis elegans
Exon13344   61   I: 5560827-5560887 Caenorhabditis elegans
Exon13351   146   I: 5560934-5561079 Caenorhabditis elegans
Exon13356   477   I: 5561165-5561641 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01A10.2h.1 5546120 5561641 1

1 Sequence

Length
4187

1 Sequence Ontology Term

Identifier Name Description
transcript