WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01A10.1.1 Sequence Name  M01A10.1.1
Length (nt)  1919   Chromosome Location  I: 5563827-5566269
Chromosome . Primary Identifier  I Chromosome Location . Start  5563827
Chromosome Location . End  5566269 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01A10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019692 fubl-4 M01A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01A10.1 M01A10.1 1761   I: 5563915-5563923

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01A10.1.1 5563827 5566269 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13360   97   I: 5563827-5563923 Caenorhabditis elegans
Exon13361   70   I: 5564126-5564195 Caenorhabditis elegans
Exon13362   117   I: 5564248-5564364 Caenorhabditis elegans
Exon13363   329   I: 5564407-5564735 Caenorhabditis elegans
Exon13364   426   I: 5564784-5565209 Caenorhabditis elegans
Exon13365   301   I: 5565277-5565577 Caenorhabditis elegans
Exon13366   412   I: 5565633-5566044 Caenorhabditis elegans
Exon13367   167   I: 5566103-5566269 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01A10.1.1 5563827 5566269 1

1 Sequence

Length
1919

1 Sequence Ontology Term

Identifier Name Description
transcript