WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E11.4c.1 Sequence Name  M01E11.4c.1
Length (nt)  1788   Chromosome Location  I: 5566343-5570081
Chromosome . Primary Identifier  I Chromosome Location . Start  5566343
Chromosome Location . End  5570081 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E11.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019713 pqn-52 M01E11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E11.4c M01E11.4c 1635   I: 5566492-5566633

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.4c.1 5566343 5570081 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13368   291   I: 5566343-5566633 Caenorhabditis elegans
Exon13369   138   I: 5566689-5566826 Caenorhabditis elegans
Exon13370   302   I: 5566912-5567213 Caenorhabditis elegans
Exon13371   243   I: 5567835-5568077 Caenorhabditis elegans
Exon13372   72   I: 5568125-5568196 Caenorhabditis elegans
Exon13373   42   I: 5568242-5568283 Caenorhabditis elegans
Exon13376   72   I: 5568673-5568744 Caenorhabditis elegans
Exon13379   346   I: 5568854-5569199 Caenorhabditis elegans
Exon13383   182   I: 5569705-5569886 Caenorhabditis elegans
Exon13385   100   I: 5569982-5570081 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.4c.1 5566343 5570081 -1

1 Sequence

Length
1788

1 Sequence Ontology Term

Identifier Name Description
transcript