WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E11.3.1 Sequence Name  M01E11.3.1
Length (nt)  2922   Chromosome Location  I: 5573214-5576749
Chromosome . Primary Identifier  I Chromosome Location . Start  5573214
Chromosome Location . End  5576749 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019712 rmh-1 M01E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E11.3 M01E11.3 2781   I: 5573243-5573503

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.3.1 5573214 5576749 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13390   290   I: 5573214-5573503 Caenorhabditis elegans
Exon13391   455   I: 5573550-5574004 Caenorhabditis elegans
Exon13392   136   I: 5574084-5574219 Caenorhabditis elegans
Exon13393   511   I: 5574286-5574796 Caenorhabditis elegans
Exon13394   510   I: 5574894-5575403 Caenorhabditis elegans
Exon13395   147   I: 5575477-5575623 Caenorhabditis elegans
Exon13396   290   I: 5575675-5575964 Caenorhabditis elegans
Exon13397   135   I: 5576023-5576157 Caenorhabditis elegans
Exon13398   60   I: 5576216-5576275 Caenorhabditis elegans
Exon13399   96   I: 5576320-5576415 Caenorhabditis elegans
Exon13400   292   I: 5576458-5576749 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.3.1 5573214 5576749 1

1 Sequence

Length
2922

1 Sequence Ontology Term

Identifier Name Description
transcript