WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E11.7a.1 Sequence Name  M01E11.7a.1
Length (nt)  4401   Chromosome Location  I: 5583407-5607529
Chromosome . Primary Identifier  I Chromosome Location . Start  5583407
Chromosome Location . End  5607529 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E11.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006508 tns-1 M01E11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E11.7a M01E11.7a 4065   I: 5583731-5583926

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7a.1 5583407 5607529 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13421   520   I: 5583407-5583926 Caenorhabditis elegans
Exon13429   110   I: 5583981-5584090 Caenorhabditis elegans
Exon13438   134   I: 5584484-5584617 Caenorhabditis elegans
Exon13447   148   I: 5584663-5584810 Caenorhabditis elegans
Exon13456   80   I: 5585998-5586077 Caenorhabditis elegans
Exon13466   120   I: 5586137-5586256 Caenorhabditis elegans
Exon13475   87   I: 5587842-5587928 Caenorhabditis elegans
Exon13487   68   I: 5591551-5591618 Caenorhabditis elegans
Exon13496   164   I: 5591677-5591840 Caenorhabditis elegans
Exon13503   240   I: 5592871-5593110 Caenorhabditis elegans
Exon13510   193   I: 5593310-5593502 Caenorhabditis elegans
Exon13518   197   I: 5593584-5593780 Caenorhabditis elegans
Exon13524   316   I: 5595571-5595886 Caenorhabditis elegans
Exon13530   150   I: 5595939-5596088 Caenorhabditis elegans
Exon13536   531   I: 5596395-5596925 Caenorhabditis elegans
Exon13542   226   I: 5597135-5597360 Caenorhabditis elegans
Exon13548   144   I: 5600674-5600817 Caenorhabditis elegans
Exon13552   131   I: 5600867-5600997 Caenorhabditis elegans
Exon13556   90   I: 5601808-5601897 Caenorhabditis elegans
Exon13559   156   I: 5602034-5602189 Caenorhabditis elegans
Exon13562   84   I: 5602232-5602315 Caenorhabditis elegans
Exon13565   236   I: 5602370-5602605 Caenorhabditis elegans
Exon13568   98   I: 5603283-5603380 Caenorhabditis elegans
Exon13572   64   I: 5603427-5603490 Caenorhabditis elegans
Exon13574   69   I: 5604926-5604994 Caenorhabditis elegans
Exon13575   45   I: 5607485-5607529 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7a.1 5583407 5607529 -1

1 Sequence

Length
4401

1 Sequence Ontology Term

Identifier Name Description
transcript