WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E11.7f.1 Sequence Name  M01E11.7f.1
Length (nt)  1713   Chromosome Location  I: 5583731-5593756
Chromosome . Primary Identifier  I Chromosome Location . Start  5583731
Chromosome Location . End  5593756 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E11.7f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006508 tns-1 M01E11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E11.7f M01E11.7f 1713   I: 5583731-5583926

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7f.1 5583731 5593756 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13427   196   I: 5583731-5583926 Caenorhabditis elegans
Exon13435   110   I: 5583981-5584090 Caenorhabditis elegans
Exon13444   134   I: 5584484-5584617 Caenorhabditis elegans
Exon13453   148   I: 5584663-5584810 Caenorhabditis elegans
Exon13462   80   I: 5585998-5586077 Caenorhabditis elegans
Exon13472   120   I: 5586137-5586256 Caenorhabditis elegans
Exon13481   87   I: 5587842-5587928 Caenorhabditis elegans
Exon13493   68   I: 5591551-5591618 Caenorhabditis elegans
Exon13502   164   I: 5591677-5591840 Caenorhabditis elegans
Exon13509   240   I: 5592871-5593110 Caenorhabditis elegans
Exon13516   193   I: 5593310-5593502 Caenorhabditis elegans
Exon13517   173   I: 5593584-5593756 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7f.1 5583731 5593756 -1

1 Sequence

Length
1713

1 Sequence Ontology Term

Identifier Name Description
transcript