WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E11.7d.1 Sequence Name  M01E11.7d.1
Length (nt)  2382   Chromosome Location  I: 5590346-5597374
Chromosome . Primary Identifier  I Chromosome Location . Start  5590346
Chromosome Location . End  5597374 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E11.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006508 tns-1 M01E11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E11.7d M01E11.7d 1995   I: 5590609-5590628

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7d.1 5590346 5597374 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13484   283   I: 5590346-5590628 Caenorhabditis elegans
Exon13491   68   I: 5591551-5591618 Caenorhabditis elegans
Exon13500   164   I: 5591677-5591840 Caenorhabditis elegans
Exon13507   240   I: 5592871-5593110 Caenorhabditis elegans
Exon13514   193   I: 5593310-5593502 Caenorhabditis elegans
Exon13522   197   I: 5593584-5593780 Caenorhabditis elegans
Exon13528   316   I: 5595571-5595886 Caenorhabditis elegans
Exon13534   150   I: 5595939-5596088 Caenorhabditis elegans
Exon13540   531   I: 5596395-5596925 Caenorhabditis elegans
Exon13547   240   I: 5597135-5597374 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7d.1 5590346 5597374 -1

1 Sequence

Length
2382

1 Sequence Ontology Term

Identifier Name Description
transcript