WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F11.5.1 Sequence Name  F46F11.5.1
Length (nt)  644   Chromosome Location  I: 5609341-5610270
Chromosome . Primary Identifier  I Chromosome Location . Start  5609341
Chromosome Location . End  5610270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006919 vha-10 F46F11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F11.5 F46F11.5 381   I: 5609588-5609686

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F11.5.1 5609341 5610270 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13578   346   I: 5609341-5609686 Caenorhabditis elegans
Exon13579   135   I: 5609925-5610059 Caenorhabditis elegans
Exon13580   163   I: 5610108-5610270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F11.5.1 5609341 5610270 -1

1 Sequence

Length
644

1 Sequence Ontology Term

Identifier Name Description
transcript