WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F11.9b.1 Sequence Name  F46F11.9b.1
Length (nt)  4104   Chromosome Location  I: 5610375-5616402
Chromosome . Primary Identifier  I Chromosome Location . Start  5610375
Chromosome Location . End  5616402 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F11.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018512 trpp-8 F46F11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F11.9b F46F11.9b 3849   I: 5610608-5610658

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F11.9b.1 5610375 5616402 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13582   284   I: 5610375-5610658 Caenorhabditis elegans
Exon13584   377   I: 5611195-5611571 Caenorhabditis elegans
Exon13587   1000   I: 5612463-5613462 Caenorhabditis elegans
Exon13589   812   I: 5613519-5614330 Caenorhabditis elegans
Exon13591   254   I: 5614437-5614690 Caenorhabditis elegans
Exon13593   395   I: 5614735-5615129 Caenorhabditis elegans
Exon13595   317   I: 5615268-5615584 Caenorhabditis elegans
Exon13597   208   I: 5615636-5615843 Caenorhabditis elegans
Exon13599   189   I: 5615888-5616076 Caenorhabditis elegans
Exon13601   268   I: 5616135-5616402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F11.9b.1 5610375 5616402 -1

1 Sequence

Length
4104

1 Sequence Ontology Term

Identifier Name Description
transcript