WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F11.10.1 Sequence Name  F46F11.10.1
Length (nt)  1290   Chromosome Location  I: 5623027-5624475
Chromosome . Primary Identifier  I Chromosome Location . Start  5623027
Chromosome Location . End  5624475 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F11.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018513 trmt-10C.1 F46F11.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F11.10 F46F11.10 1173   I: 5623144-5623572

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F11.10.1 5623027 5624475 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13622   546   I: 5623027-5623572 Caenorhabditis elegans
Exon13623   302   I: 5623658-5623959 Caenorhabditis elegans
Exon13624   442   I: 5624034-5624475 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F11.10.1 5623027 5624475 -1

1 Sequence

Length
1290

1 Sequence Ontology Term

Identifier Name Description
transcript