WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F11.1b.1 Sequence Name  F46F11.1b.1
Length (nt)  3815   Chromosome Location  I: 5627813-5637620
Chromosome . Primary Identifier  I Chromosome Location . Start  5627813
Chromosome Location . End  5637620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018508 F46F11.1 F46F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F11.1b F46F11.1b 3678   I: 5627826-5627873

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F11.1b.1 5627813 5637620 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13632   61   I: 5627813-5627873 Caenorhabditis elegans
Exon13635   87   I: 5627921-5628007 Caenorhabditis elegans
Exon13637   117   I: 5628066-5628182 Caenorhabditis elegans
Exon13639   66   I: 5628227-5628292 Caenorhabditis elegans
Exon13641   249   I: 5628340-5628588 Caenorhabditis elegans
Exon13643   366   I: 5629908-5630273 Caenorhabditis elegans
Exon13645   354   I: 5630512-5630865 Caenorhabditis elegans
Exon13647   134   I: 5631131-5631264 Caenorhabditis elegans
Exon13649   146   I: 5631646-5631791 Caenorhabditis elegans
Exon13651   242   I: 5631991-5632232 Caenorhabditis elegans
Exon13653   417   I: 5632279-5632695 Caenorhabditis elegans
Exon13655   357   I: 5632759-5633115 Caenorhabditis elegans
Exon13657   218   I: 5633519-5633736 Caenorhabditis elegans
Exon13659   73   I: 5633791-5633863 Caenorhabditis elegans
Exon13661   146   I: 5633912-5634057 Caenorhabditis elegans
Exon13663   110   I: 5634126-5634235 Caenorhabditis elegans
Exon13667   51   I: 5635642-5635692 Caenorhabditis elegans
Exon13669   54   I: 5636717-5636770 Caenorhabditis elegans
Exon13671   102   I: 5636867-5636968 Caenorhabditis elegans
Exon13673   102   I: 5637018-5637119 Caenorhabditis elegans
Exon13674   363   I: 5637258-5637620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F11.1b.1 5627813 5637620 1

1 Sequence

Length
3815

1 Sequence Ontology Term

Identifier Name Description
transcript