WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55F8.2a Sequence Name  F55F8.2a
Length (nt)  2241   Chromosome Location  I: 5646472-5646576
Chromosome . Primary Identifier  I Chromosome Location . Start  5646472
Chromosome Location . End  5646576
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F8.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11190 F55F8.2, isoform a 84.7 746 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00048524
WBRNAi00075477
WBRNAi00082695
WBRNAi00003793
WBRNAi00105950
WBRNAi00070987
WBRNAi00075478
WBRNAi00025679
WBRNAi00117076
WBRNAi00008153
WBRNAi00025678
WBRNAi00106850
WBRNAi00082432
WBRNAi00032886

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55F8.2a 5646472 5646576 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018890 F55F8.2 F55F8.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55F8.2a 5646472 5646576 -1
CDS:F55F8.2a 5646659 5647000 -1
CDS:F55F8.2a 5647044 5647153 -1
CDS:F55F8.2a 5647377 5647776 -1
CDS:F55F8.2a 5647878 5648002 -1
CDS:F55F8.2a 5648062 5648186 -1
CDS:F55F8.2a 5648464 5648976 -1
CDS:F55F8.2a 5649036 5649400 -1
CDS:F55F8.2a 5649494 5649649 -1

1 Sequence

Length
2241

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55F8.2a.1 F55F8.2a.1 2351   I: 5646369-5649656