WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55F8.3.1 Sequence Name  F55F8.3.1
Length (nt)  3012   Chromosome Location  I: 5649756-5653648
Chromosome . Primary Identifier  I Chromosome Location . Start  5649756
Chromosome Location . End  5653648 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018891 F55F8.3 F55F8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55F8.3 F55F8.3 2733   I: 5649963-5650146

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55F8.3.1 5649756 5653648 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13701   391   I: 5649756-5650146 Caenorhabditis elegans
Exon13702   119   I: 5650203-5650321 Caenorhabditis elegans
Exon13703   107   I: 5650386-5650492 Caenorhabditis elegans
Exon13704   474   I: 5650747-5651220 Caenorhabditis elegans
Exon13705   442   I: 5651279-5651720 Caenorhabditis elegans
Exon13706   428   I: 5651768-5652195 Caenorhabditis elegans
Exon13707   367   I: 5652294-5652660 Caenorhabditis elegans
Exon13708   136   I: 5652708-5652843 Caenorhabditis elegans
Exon13709   150   I: 5652904-5653053 Caenorhabditis elegans
Exon13710   100   I: 5653106-5653205 Caenorhabditis elegans
Exon13711   95   I: 5653253-5653347 Caenorhabditis elegans
Exon13712   113   I: 5653392-5653504 Caenorhabditis elegans
Exon13713   90   I: 5653559-5653648 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55F8.3.1 5649756 5653648 -1

1 Sequence

Length
3012

1 Sequence Ontology Term

Identifier Name Description
transcript