WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56H1.4 Sequence Name  F56H1.4
Length (nt)  1293   Chromosome Location  I: 5742051-5742243
Chromosome . Primary Identifier  I Chromosome Location . Start  5742051
Chromosome Location . End  5742243
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H1.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17915 RPT-5 48.1 430 Caenorhabditis elegans
 

Other

36 RNAi

WormBase ID
WBRNAi00096601
WBRNAi00095649
WBRNAi00096604
WBRNAi00066699
WBRNAi00085631
WBRNAi00007874
WBRNAi00000069
WBRNAi00025713
WBRNAi00093510
WBRNAi00093515
WBRNAi00064995
WBRNAi00048769
WBRNAi00093153
WBRNAi00076494
WBRNAi00032985
WBRNAi00022821
WBRNAi00025714
WBRNAi00081287
WBRNAi00117152
WBRNAi00095895
WBRNAi00095972
WBRNAi00096047
WBRNAi00096124
WBRNAi00096201
WBRNAi00096278
WBRNAi00096373
WBRNAi00096456
WBRNAi00096539
WBRNAi00096638
WBRNAi00078755

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56H1.4 5742051 5742243 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004505 rpt-5 F56H1.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56H1.4 5742051 5742243 -1
CDS:F56H1.4 5742299 5742444 -1
CDS:F56H1.4 5742509 5742801 -1
CDS:F56H1.4 5742894 5743554 -1

1 Sequence

Length
1293

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56H1.4.1 F56H1.4.1 1493   I: 5741868-5743571