WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H1.6.1 Sequence Name  F56H1.6.1
Length (nt)  1203   Chromosome Location  I: 5744180-5745617
Chromosome . Primary Identifier  I Chromosome Location . Start  5744180
Chromosome Location . End  5745617 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044305 rad-8 F56H1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H1.6 F56H1.6 1101   I: 5744184-5744333

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H1.6.1 5744180 5745617 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13893   154   I: 5744180-5744333 Caenorhabditis elegans
Exon13894   189   I: 5744378-5744566 Caenorhabditis elegans
Exon13895   293   I: 5744620-5744912 Caenorhabditis elegans
Exon13896   139   I: 5744958-5745096 Caenorhabditis elegans
Exon13897   129   I: 5745143-5745271 Caenorhabditis elegans
Exon13898   299   I: 5745319-5745617 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H1.6.1 5744180 5745617 1

1 Sequence

Length
1203

1 Sequence Ontology Term

Identifier Name Description
transcript