WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H1.1.1 Sequence Name  F56H1.1.1
Length (nt)  3033   Chromosome Location  I: 5746633-5754306
Chromosome . Primary Identifier  I Chromosome Location . Start  5746633
Chromosome Location . End  5754306 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H1.1 F56H1.1 2754   I: 5746725-5746871

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H1.1.1 5746633 5754306 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13899   239   I: 5746633-5746871 Caenorhabditis elegans
Exon13900   235   I: 5749002-5749236 Caenorhabditis elegans
Exon13901   215   I: 5749307-5749521 Caenorhabditis elegans
Exon13902   109   I: 5749908-5750016 Caenorhabditis elegans
Exon13903   219   I: 5750065-5750283 Caenorhabditis elegans
Exon13904   92   I: 5750761-5750852 Caenorhabditis elegans
Exon13905   73   I: 5750904-5750976 Caenorhabditis elegans
Exon13906   149   I: 5751034-5751182 Caenorhabditis elegans
Exon13907   95   I: 5751247-5751341 Caenorhabditis elegans
Exon13908   90   I: 5751386-5751475 Caenorhabditis elegans
Exon13909   91   I: 5751518-5751608 Caenorhabditis elegans
Exon13910   128   I: 5751915-5752042 Caenorhabditis elegans
Exon13911   138   I: 5752095-5752232 Caenorhabditis elegans
Exon13912   156   I: 5752489-5752644 Caenorhabditis elegans
Exon13913   273   I: 5752731-5753003 Caenorhabditis elegans
Exon13914   100   I: 5753113-5753212 Caenorhabditis elegans
Exon13915   291   I: 5753270-5753560 Caenorhabditis elegans
Exon13916   340   I: 5753967-5754306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H1.1.1 5746633 5754306 1

1 Sequence

Length
3033

1 Sequence Ontology Term

Identifier Name Description
transcript